Function reference

All functions

colNormalize()

Normalize each column of the input matrix by the column sum

plotBinary()

Create binary plots

plotQuaternary()

Create quaternary simplex plots

plotTernary()

Create ternary plots

rnaCluster

Major cell type annotation of the example mouse bone marrow data

rnaRaw

Mouse bone marrow scRNAseq example data

rnaVelo

Velocity graph of the example mouse bone marrow data

selectTopFeatures()

Pick top differentially presented features for similarity calculation

show(<plist>) print(<plist>)

Show plist object produced with plot3D package

writeQuaternaryGIF()

Create GIF image for dynamic rotating view of 3D quaternary simplex plot